Darrell Nelson Kotton MD

Professor, Pulmonary, Allergy, Sleep & Critical Care Medicine

Professor, Pathology & Laboratory Medicine

670 Albany St
Darrell Kotton
Sections

Pulmonary, Allergy, Sleep & Critical Care Medicine

Centers

Center for Regenerative Medicine

Pulmonary Center

Framingham Heart Study

Evans Center for Interdisciplinary Biomedical Research

Biography

Darrell N. Kotton, MD is the founding director of the Center for Regenerative Medicine of Boston University and Boston Medical Center. He is a physician-scientist with attending physician duties in pulmonary and critical care medicine at Boston Medical Center and is the David C. Seldin Professor in the department of medicine and in the department of pathology and laboratory medicine at the Boston University Chobanian and Avedesian School of Medicine. Dr. Kotton is an Allen Distinguished Investigator, a Paul G. Allen Frontiers Group advised program of the Paul G. Allen Family Foundation. He is also an elected member of the American Society of Clinical Investigators and the Association of American Physicians. He leads a basic research laboratory, funded continuously by the NIH since 2004, focused on lung regeneration and stem cell biology, and he serves on the NIH’s National Heart Lung and Blood Institute’s Board of External Experts. He is the recipient of the American Thoracic Society’s “Recognition Award for Scientific Accomplishments” (2018), the AAMC inaugural national “Research Resources Sharing Award” (2017), the Alpha-1 Foundation’s “Researcher of the Year” (2013) and “Shillelagh” (2010) Awards, Boston University’s Graduate Medical Sciences Educator of the Year Award (2018), and the Robert Dawes Evans Senior Research Mentor Award from Boston University.

Expertise: Stem Cell Biology; iPS cells; Reprogramming; Gene Therapy; Lung Developmental Biology.

Other Positions

Education

MD, Washington University School of Medicine

BA, University of Pennsylvania

Publications

Published on 2/2/2026

Sen C, Langerman J, Alysandratos K, Alber AB, Cherry C, Castillo K, Siegel S, Chandran RR, Choi W, Rickabaugh T, Kotton DN, Plath K, Gomperts BN. Modeling cell-cell interactions to advance drug discovery in Idiopathic Pulmonary Fibrosis. bioRxiv. 2026 Feb 02. PMID: 41676623.

Published on 2/1/2026

Kohn A, Herriges MJ, Basak P, Ma L, Thapa BR, Kotton DN, Hawkins FJ. Targeted Preconditioning and Cell Transplantation in the Murine Lower Respiratory Tract. Am J Respir Cell Mol Biol. 2026 Feb 01; 74(2):155-166. PMID: 40540686.

Published on 1/31/2026

Alber AB, Kwong G, Gupta VK, Dooley PE, Patel JR, Bawa PS, Minakin K, Jones D, Gopal D, Souza H, Yampolskaya M, Vilker E, Sen C, Conchola AS, Mehta P, Gomperts BN, Frum T, Spence JR, Alysandratos KD, Kotton DN. Bidirectional fibrogenic cross-talk revealed in a human iPSC-derived epithelial-mesenchymal co-culture model of pulmonary fibrosis. bioRxiv. 2026 Jan 31. PMID: 41659605.

Published on 10/14/2025

Dobie AC, Win W, Kotton DN, Monaghan JR. Toward Human Lung Regeneration: Gaining Insights from the Axolotl Salamander Ambystoma mexicanum. Am J Respir Cell Mol Biol. 2025 Oct 14. PMID: 41086376.

Published on 10/6/2025

Yabaji SM, Lata S, Tseng AE, Araveti PB, Lo M, Gavrish I, O'Connell AK, Gertje HP, Belkina AC, Thurman CE, Kiyokawa H, Kotton D, Tan S, Endsley JJ, Bishai WR, Crossland N, Kobzik L, Kramnik I. Dysplastic lung repair fosters a tuberculosis-promoting microenvironment through maladaptive macrophage polarization. PLoS Pathog. 2025 Oct; 21(10):e1013563. PMID: 41052208.

Published on 9/30/2025

Hoffman ET, Shah A, Barboza WR, Rodriguez LR, Dherwani R, Dooley PE, Minakin K, Tomer Y, Ayers LJ, Jones D, Murthy A, Bennett A, Lange AN, Bawa PS, Wang F, Babu A, Chavez K, Nakamoto RS, Cooper CH, Basil MC, Raredon MSB, Kotton DN, Alysandratos KD, Katzen J. Aberrant intermediate alveolar epithelial cells promote pathogenic activation of lung fibroblasts in preclinical fibrosis models. Nat Commun. 2025 Sep 30; 16(1):8710. PMID: 41027873.

Published on 8/30/2025

Cooney AL, Lamer S, Yang P, Wegner DJ, White FV, Cole FS, Wohlford-Lenane C, Hennessey E, Bawa P, Kotton DN, Sinn PL, Wambach JA, McCray PB. Lentiviral-mediated gene complementation rescues pathogenic ABCA3 variants. bioRxiv. 2025 Aug 30. PMID: 40909633.

Published on 8/1/2025

Lingappan K, Sundar IK, Prakash YS, Redente EF, Sin DD, Han MK, Lahm T, Krymskaya VP, Kotton DN, Kulkarni HS, Jain R, Königshoff M, Eghbali M, Anguera M, Arnold A, Silveyra P, DeMeo DL. Addressing Sex as a Biological Variable in Preclinical Models of Lung Disease: An Official American Thoracic Society Research Statement. Am J Respir Crit Care Med. 2025 Aug; 211(8):1346-1368. PMID: 40748009.

Published on 7/24/2025

Undeutsch HJ, Posabella A, Kotton DN, Hollenberg AN. Protocol for directed differentiation of human induced pluripotent stem cells into thyroid follicular epithelial cells. STAR Protoc. 2025 Sep 19; 6(3):103979. PMID: 40714559.

Published on 7/1/2025

Rodríguez LR, Alysandratos KD, Katzen J, Murthy A, Roque Barboza W, Tomer Y, Bui S, Acín-Pérez R, Petcherski A, Minakin K, Carson P, Iyer S, Chavez K, Cooper CH, Babu A, Weiner AI, Vaughan AE, Arany Z, Shirihai OS, Kotton DN, Beers MF. Impaired AMPK control of alveolar epithelial cell metabolism promotes pulmonary fibrosis. JCI Insight. 2025 Aug 08; 10(15). PMID: 40591409.

View full list of 189 publications.