Vijaya B. Kolachalama PhD, FAHA

Associate Professor, Computational Biomedicine

Assistant Professor, Computing & Data Sciences Administration

72 East Concord Street | (617) 358-7253
Vijaya Kolachalama
Sections

Computational Biomedicine

Centers

Whitaker Cardiovascular Institute

Evans Center for Interdisciplinary Biomedical Research

Biography

We are a highly interdisciplinary research group, bringing together trainees and scientists from computer science, neuroscience, bioinformatics, physics, computing and data sciences, electrical and computer engineering, and medicine. We actively collaborate with clinicians and domain experts across diverse specialties and institutions globally. This unique convergence of disciplines has enabled us to publish across the full spectrum of scientific inquiry, from top-tier journals like Nature Medicine to premier computer science venues such as the International Conference on Machine Learning (ICML). Our mission is to create methods to fit the science and not make science fit the methods. Together, we are advancing impactful science at the intersection of AI and human health.

Education

BS, Indian Institute of Technology, Kharagpur, India

PhD, University of Southampton, UK

Publications

Published on 7/24/2026

Ibrahim A, Kolachalama VB, Abuelsamen T, Mekki O, Takayama S, Wynne BM, Chemaly E, Alsaleem A, Revelo M, Sauer L, Vitale A, Thomas A, Pasaye M, Schmitz-Valckenberg S, Gregory M, Bernstein PS, Al-Rabadi L. Noninvasive optical coherence tomography biomarker for Alport syndrome, COL4-related focal segmental glomerulosclerosis, and COL4 variant interpretation. Kidney Int. 2026 Jul 24. PMID: 42498059.

Published on 6/17/2026

Krishnan L, Gunasekaran G, Dhore T, Lauinger A, Kolachalama V, Pappu S. Leveraging artificial intelligence for analysis of the gut microbiome for dementia diagnosis: a scoping review and discussion. Front Dement. 2026; 5:1865441. PMID: 42389671.

Published on 4/16/2026

Ahangaran M, Jia S, Chitalia S, Athavale A, Francis JM, O'Donnell MW, Bavi SR, Gupta UD, Kolachalama VB. Performance of open-source large language models on nephrology self-assessment program. medRxiv. 2026 Apr 16. PMID: 42064960.

Published on 4/8/2026

Xu L, Kefella Y, Zhang Y, Conrad RD, Anderson KE, Krysan K, Liu G, Kane E, Pennycuick A, Merrick DT, Janes SM, Reid ME, Burks EJ, Billatos E, Mazzilli SA, Kolachalama VB, Beane JE. Attention-based deep learning for analysis of pathology images and gene expression data in lung squamous premalignant lesions. Genome Med. 2026 Apr 08; 18(1). PMID: 41952176.

Published on 4/4/2026

Lteif D, Jia S, Bit S, Kaliaev A, Mian AZ, Small JE, Mangaleswaran B, Plummer BA, Bargal SA, Au R, Kolachalama VB. Vision-language framework for multi-sequence brain magnetic resonance imaging. medRxiv. 2026 Apr 04. PMID: 41959770.

Published on 3/23/2026

Kowshik SS, Jasodanand VH, Bellitti M, Puducheri S, Xu L, Liu Y, Saichandran KS, Dwyer BC, Gabelle A, Hao H, Kedar S, Murman DL, O'Shea SA, Saint-Hilaire MH, Samudra NP, Sartor EA, Swaminathan A, Taraschenko O, Yuan J, Au R, Kolachalama VB. Domain-adapted language model using reinforcement learning for various dementias. medRxiv. 2026 Mar 23. PMID: 41929317.

Published on 3/16/2026

Pinheiro A, Karjadi C, Tripodis Y, Kolachalama VB, Lunetta K, Demissie S, Liu C, Au R, Mohammed S. Predicting cognitive impairment using novel functional features of spatial proximity and circularity in the digital clock drawing test. medRxiv. 2026 Mar 16. PMID: 41891039.

Published on 2/13/2026

Decker JW, BaniHani D, HonShideler C, Lotfollahzadeh S, Wu Wong DJ, Farber A, Siracuse JJ, Idrees N, Dember L, Bader M, Ganguli S, Kolachalama V, Shazly T, Chitalia VC. Intravascular Ultrasound is More Accurate Than Angiography in Arteriovenous Vascular Access Lesions. Kidney360. 2026 Feb 13. PMID: 41686504.

Published on 2/7/2026

Jia S, Bit S, Jasodanand VH, Liu Y, Kolachalama VB. Agentic memory-augmented retrieval and evidence grounding for medical question-answering tasks. Int J Med Inform. 2026 Jun 01; 212:106339. PMID: 41713127.

Published on 1/12/2026

Shazly T, Eberth JF, Kostelnik CJ, Uline MJ, Chitalia VC, Spinale FG, Alshareef A, Kolachalama VB. Correction to "Hydrophilic Coating Microstructure Mediates Acute Drug Transfer in Drug-Coated Balloon Therapy". ACS Appl Bio Mater. 2026 Feb 02; 9(3):1819. PMID: 41521858.

View full list of 143 publications.