{"id":21640,"date":"2023-09-13T13:24:51","date_gmt":"2023-09-13T17:24:51","guid":{"rendered":"http:\/\/www.bumc.bu.edu\/ppb\/?page_id=21640"},"modified":"2025-08-04T13:26:22","modified_gmt":"2025-08-04T17:26:22","slug":"the-makino-lab","status":"publish","type":"page","link":"https:\/\/www.bumc.bu.edu\/ppb\/the-makino-lab\/","title":{"rendered":"The Makino Lab"},"content":{"rendered":"<h4><strong>Research<\/strong><\/h4>\n<h5><strong>The rate of cGMP synthesis modulates visual transduction <\/strong><\/h5>\n<p style=\"text-align: justify;\">In retinal rods, cGMP is the second messenger that links photon capture by rhodopsin on internal disk membranes to ion channel activity on the plasma membrane. Rhodopsin photoexcitation leads to the hydrolysis of cGMP and subsequent closure of cGMP-gated channels, curtailing the entry of Na+ and Ca2+. During response recovery, retina-specific guanylyl cyclases (retGCs) replenish cGMP, reopen the channels, and restore the influx of cations. To facilitate the recovery, guanylyl cyclase activating proteins (GCAPs) sense the decrease in Ca2+ caused by illumination and greatly stimulate the rate of cGMP synthesis.<\/p>\n<p style=\"text-align: justify;\">All vertebrate rods use at least two GCAPs: GCAP1 and GCAP2. Why are 2 types of GCAPS necessary? Working closely with the Dizhoor laboratory at Salus University, we explored the basis for the dual system by using electrophysiological methods to study rods of mutant mice that lack one or both GCAPs. Deletion of GCAP2 did not change the amplitude of the single photon response, but slowed its recovery (Fig. 1). Elimination of GCAP1 caused the photon response to rise for twice as long to an amplitude that was twice as large. Although knockout of GCAP2 did not affect GCAP1 expression, knockout of GCAP1 did cause an up-regulation of GCAP2 as detected by immunofluorescence and Western blot. The overexpression of GCAP2 resulted in acceleration of the response recovery rather than the slowdown that was expected from the loss of GCAP1 alone.<\/p>\n<figure id=\"attachment_21240\" aria-describedby=\"caption-attachment-21240\" style=\"width: 660px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" src=\"\/ppb\/files\/2023\/07\/figure_CM1.jpg\" alt=\"\" width=\"650\" height=\"385\" class=\"wp-image-21240 size-full\" srcset=\"https:\/\/www.bumc.bu.edu\/ppb\/files\/2023\/07\/figure_CM1.jpg 650w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2023\/07\/figure_CM1-506x300.jpg 506w\" sizes=\"(max-width: 650px) 100vw, 650px\" \/><figcaption id=\"caption-attachment-21240\" class=\"wp-caption-text\"><strong>Figure 1.<\/strong> The single photon responses of wild-type control (black trace), GCAP1 knockout (blue), GCAP2 knockout (orange), and GCAPs1&amp;2 knockout (gray) mouse rods.<\/figcaption><\/figure>\n<p style=\"text-align: justify;\">Thus the two GCAPs regulate retGCs sequentially (Fig. 2). Because of its lower Ca2+ affinity, GCAP1 is the first responder and acts to limit response amplitude. GCAP2, with a higher Ca2+ affinity, does not assist retGCs until Ca2+ concentration declines even further, which happens somewhat during a single photon response, but to a greater extent with bright light. GCAP2 stimulation of retGCs provides for a faster response recovery. Together, the two GCAPs tune the operating range and temporal resolution of rod photoreceptors.<\/p>\n<figure id=\"attachment_21241\" aria-describedby=\"caption-attachment-21241\" style=\"width: 660px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" src=\"\/ppb\/files\/2023\/07\/figure_CM2.jpg\" alt=\"\" width=\"650\" height=\"212\" class=\"wp-image-21241 size-full\" \/><figcaption id=\"caption-attachment-21241\" class=\"wp-caption-text\"><strong>Figure 2.<\/strong> Relay model for GCAPs regulation of retGCs activity. The physiological free Ca2+ concentration ranges from 250 nM in the dark to 20 nM in the light in a mouse rod. In the dark, both GCAPs bind Ca2+ and suppress retGC activity. Under illumination, GCAP1 responds first to the light-induced Ca2+ decrease, releasing its bound Ca2+ and allowing Mg2+ to take its place. With Mg2+ bound, GCAP1 stimulates retGC activity. As Ca2+ concentration falls further, GCAP2 follows suit. With the reopening of the cGMP-gated channels, Ca2+ concentration rises, GCAPs rebind Ca2+ and retGC activity returns to its basal level.<\/figcaption><\/figure>\n<p>&nbsp;<\/p>\n<p style=\"text-align: justify;\">The Sharma and Duda laboratories at Salus University discovered that bicarbonate ions stimulate cGMP synthesis by retGC, independent of GCAPs. In single cell recordings, we discovered that bicarbonate operated synergistically with GCAPs and low Ca2+ in rods and in cones. As a result, bicarbonate boosted the size of the maximal flash response, reduced relative sensitivity to flashes and altered response kinetics (Fig. 3).<\/p>\n<figure id=\"attachment_21237\" aria-describedby=\"caption-attachment-21237\" style=\"width: 1243px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" src=\"\/ppb\/files\/2023\/07\/cm_fig3.jpg\" alt=\"\" width=\"1233\" height=\"652\" class=\"wp-image-21237 size-full\" srcset=\"https:\/\/www.bumc.bu.edu\/ppb\/files\/2023\/07\/cm_fig3.jpg 1233w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2023\/07\/cm_fig3-567x300.jpg 567w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2023\/07\/cm_fig3-1024x541.jpg 1024w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2023\/07\/cm_fig3-768x406.jpg 768w\" sizes=\"(max-width: 1233px) 100vw, 1233px\" \/><figcaption id=\"caption-attachment-21237\" class=\"wp-caption-text\"><strong>Figure 3.<\/strong> Bicarbonate increased the maximal flash response amplitude and quickened flash response kinetics in a salamander rod. Flash responses were recorded first in MOPS\/Ringer\u2019s, then in the presence of 50 mM bicarbonate, and finally during a wash with MOPS\/Ringer\u2019s.<\/figcaption><\/figure>\n<p style=\"text-align: justify;\">Rods do not express carbonic anhydrase, suggesting that modulation of visual transduction involves bicarbonate produced exogenously. We found that only rods retaining an intact spherule were affected by bicarbonate, indicating that uptake occurred in the inner segment, near the synaptic ending. In contrast, cones took up bicarbonate at their outer segments as well as at their inner segments. Moreover, cones did express carbonic anhydrase, which meant that they were affected by endogenous as well as exogenous bicarbonate.<\/p>\n<p><img loading=\"lazy\" src=\"\/ppb\/files\/2023\/07\/rod02.gif\" alt=\"\" width=\"324\" height=\"236\" class=\"wp-image-21239 alignleft\" \/><img loading=\"lazy\" src=\"\/ppb\/files\/2023\/07\/CONE01.gif\" alt=\"\" width=\"306\" height=\"222\" class=\"wp-image-21238 alignright\" \/><\/p>\n<p><br style=\"clear: both;\" \/>Figure 4. Pathway for bicarbonate through rods and cones. Bicarbonate enters rods and cones at their synapses (1). Cones are also able to take up bicarbonate at their outer segments, perhaps by reversed action of a bicarbonate\/Cl- exchanger (2). Carbon dioxide is able to pass through the plasma membrane and in cones, but not in rods, gets converted to bicarbonate by carbonic anhydrase. Bicarbonate is removed from rods and cones by a bicarbonate\/Cl- exchanger located in their outer segments.<\/p>\n<p><strong><br style=\"clear: both;\" \/>Recent Publications<\/strong><\/p>\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/?term=makino+cl%5Bauthor%5D+OR+(makino+c+AND+(baylor+or+schiffman))\">Full listing of citations on PubMed<\/a><\/p>\n<p><strong>PAPERS<\/strong><\/p>\n<p>Makino, C.L., Talukder, Md. S.U., Kim, B., Adhikari, R.D., Hamm, H.E., Gurevich, V.V., Klaus, C. and Caruso, G. (2025) The effects of bicarbonate on the aberrant photon response in murine rod photoreceptors. Biophys J, in press. doi: 10.1016\/j.bpj.2025.06.035.<\/p>\n<p>Adhikari, R.D., Kossoff, A.M., Cornwall, M.C. and Makino, C.L. (2023) Bicarbonate boosts flash response amplitude to augment absolute sensitivity and extend dynamic range in murine retinal rods. Front Mol Neurosci, 16: 1125006. PMCID: PMC10140344.<\/p>\n<p>Caruso, G., Klaus, C., Hamm, H.E., Gurevich, V.V., Bisegna, P., Andreucci, D., DiBenedetto, E. and Makino, C.L. (2023) Pepperberg plot: Modeling flash response saturation in retinal rods of mouse. Front Mol Neurosci, 15: 1054449. PMCID: PMC9880052.<\/p>\n<p>Geva, P., Caruso, G., Klaus, C.J., Hamm, H.E., Gurevich, V.V., DiBenedetto, E. and Makino, C.L. (2022) Effects of cell size and bicarbonate on single photon response variability in retinal rods. Front Mol Neurosci, 15: 1050545. PMCID: PMC9796569.<\/p>\n<p>Klaus, C., Caruso, G., Gurevich, V.V., Hamm, H.E., Makino, C.L. and DiBenedetto, E. (2021) Phototransduction in retinal cones: Analysis of parameter importance. PLoS One, 16: e0258721. PMCID: PMC8553137.<\/p>\n<p>Caruso, G., Klaus, C., Hamm, H.E., Gurevich, V.V., Makino, C.L. and DiBenedetto, E. (2020) Position of rhodopsin photoisomerization on the disk surface confers variability to the rising phase of the single photon response in vertebrate rod photoreceptors. PLoS One, 15: e0240527. PMCID: PMC7556485.<\/p>\n<p><strong>BOOK CHAPTERS<\/strong><\/p>\n<p>MacLeish, P.R. and Makino, C.L. (2024) Photoresponses of rods and cones, in Adler\u2019s Physiology of the Eye 12th edition, eds. L.A. Levin, P.L. Kaufman and M.E. Hartnett. Elsevier, pp. 432-450.<\/p>\n<p><strong>TUTORIAL<\/strong><\/p>\n<p>Horrigan, D and Makino, C.L. (2022) How do we see? An introduction to the biophysics of visual transduction. Biophysical Society Website:<br \/>\n<a href=\"https:\/\/www.biophysics.org\/Portals\/0\/BPSAssets\/Articles\/An_introduction_to_the_biophysics_of_visual_transductionv5_1.pdf\">https:\/\/www.biophysics.org\/Portals\/0\/BPSAssets\/Articles\/An_introduction_to_the_biophysics_of_visual_transductionv5_1.pdf<\/a><\/p>\n<p><strong>Lab Members<\/strong><\/p>\n<p><img loading=\"lazy\" src=\"\/ppb\/files\/2025\/08\/ab1.jpg\" alt=\"\" width=\"207\" height=\"207\" class=\"alignleft size-full wp-image-23813\" srcset=\"https:\/\/www.bumc.bu.edu\/ppb\/files\/2025\/08\/ab1.jpg 207w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2025\/08\/ab1-150x150.jpg 150w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2025\/08\/ab1-100x100.jpg 100w\" sizes=\"(max-width: 207px) 100vw, 207px\" \/><br \/>\n<br style=\"clear: both;\" \/>Andrew Best<\/p>\n<p>&nbsp;<\/p>\n<p><img loading=\"lazy\" src=\"\/ppb\/files\/2025\/08\/at1.jpg\" alt=\"\" width=\"207\" height=\"207\" class=\"alignleft size-full wp-image-23812\" srcset=\"https:\/\/www.bumc.bu.edu\/ppb\/files\/2025\/08\/at1-150x150.jpg 150w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2025\/08\/at1-300x298.jpg 300w, https:\/\/www.bumc.bu.edu\/ppb\/files\/2025\/08\/at1-100x100.jpg 100w\" sizes=\"(max-width: 207px) 100vw, 207px\" \/><br \/>\n<br style=\"clear: both;\" \/>Aanvi Trivedi<\/p>\n<h5><\/h5>\n<h5>Past Lab Members:<\/h5>\n<p>Md S Uddin Talukder, Pd.D.<br \/>\nBrianna Kim<br \/>\nRajan Adhikari, Ph.D.<br \/>\nAnaid Perez<br \/>\nPolina Geva, Ph.D.<br \/>\nAmanda Kossoff<br \/>\nParis Chakravarty<\/p>\n<h5><br style=\"clear: both;\" \/>Links:<\/h5>\n<p><a href=\"https:\/\/www.bumc.bu.edu\/busm\/profile\/clint-makino\/\">Faculty Profile<\/a><br \/>\n<a href=\"https:\/\/www.researchgate.net\/profile\/Clint-Makino\">ResearchGate<\/a><\/p>\n<h4><\/h4>\n<h4><br style=\"clear: both;\" \/><br style=\"clear: both;\" \/>Contact Us<\/h4>\n<p>Department of Pharmacology, Physiology &amp; Biophysics<br \/>\nChobanian &amp; Avedisian School of Medicine<br \/>\n700 Albany Street\u00a0<span>W402B<\/span><br \/>\nBoston, MA 02118-2526<\/p>\n<p>Phone: (617) 358-8470<br \/>\ne-mail: cmakino@bu.edu<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Research The rate of cGMP synthesis modulates visual transduction In retinal rods, cGMP is the second messenger that links photon capture by rhodopsin on internal disk membranes to ion channel activity on the plasma membrane. Rhodopsin photoexcitation leads to the hydrolysis of cGMP and subsequent closure of cGMP-gated channels, curtailing the entry of Na+ and [&hellip;]<\/p>\n","protected":false},"author":1811,"featured_media":0,"parent":0,"menu_order":46,"comment_status":"closed","ping_status":"closed","template":"page-templates\/no-sidebars.php","meta":[],"_links":{"self":[{"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/pages\/21640"}],"collection":[{"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/users\/1811"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/comments?post=21640"}],"version-history":[{"count":15,"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/pages\/21640\/revisions"}],"predecessor-version":[{"id":21645,"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/pages\/21640\/revisions\/21645"}],"wp:attachment":[{"href":"https:\/\/www.bumc.bu.edu\/ppb\/wp-json\/wp\/v2\/media?parent=21640"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}