{"id":1504,"date":"2016-10-25T12:26:59","date_gmt":"2016-10-25T16:26:59","guid":{"rendered":"https:\/\/www.bumc.bu.edu\/compbiomed\/?page_id=1504"},"modified":"2023-10-04T10:20:12","modified_gmt":"2023-10-04T14:20:12","slug":"seminars","status":"publish","type":"page","link":"https:\/\/www.bumc.bu.edu\/compbiomed\/seminars\/","title":{"rendered":"Seminars"},"content":{"rendered":"

2022-2023 CBM Seminar Series<\/strong><\/h3>\n

Tuesdays <\/strong>3:00-4:00 PM
\n<\/strong>Virtual via Zoom<\/b><\/strong><\/h4>\n

Updated 5\/5\/2023<\/em><\/p>\n

 <\/p>\n

Tuesday, May 16, 2023<\/u><\/strong><\/p>\n

Natasha Gurevich<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Joshua Campbell and Lab of Stefano Monti\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 Junxiang Xu<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Joshua Campbell and Lab of Ruben Dries<\/p>\n

\u00a0<\/em>Tuesday, May 23, 2023
\n<\/u><\/strong>\u201cRecontextualizing Gene Expression Signatures\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Andrew Chen<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Stefano Monti<\/p>\n

Tuesday, June 6, 2023<\/u><\/strong><\/p>\n

Whitney Souery<\/strong>, MD\/PhD student, Bioinformatics Program, Lab of Ehab Billatos and Lab of Avrum Spira and Marc Lenburg\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0Amulya Shastry<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Joshua Campbell, Lab of Jay Mizgerd and Lab of Stefano Monti<\/p>\n

 <\/p>\n

Tuesday, June 20, 2023<\/u><\/strong><\/p>\n

Yulia Shaykhutdinova, M.Sc<\/strong>, Research Fellow, Lab of Ignaty Leshchiner<\/p>\n

“Bronchial and Nasal gene expression alterations associated with Sulforaphane”\u00a0 \u00a0 <\/strong>Yohana Kefella<\/strong>, Bioinformatics Analyst, Lab of Jennifer Beane<\/p>\n

 <\/p>\n

\n

Past Seminars<\/strong><\/p>\n

Tuesday, September 6, 2022<\/u><\/strong><\/p>\n

\u201cCaDrA: A Containerized and Cloud-Deployable Open-Source Software Package for Candidate Driver Analysis of Multi-Omics Data\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Reina Chau<\/strong>, Bioinformatician, Lab of Stefano Monti<\/p>\n

\u201cCharacterization of early lung adenocarcinoma immune microenvironment through single cell sequencing\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Yusuke Koga<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Joshua Campbell<\/p>\n

<\/strong>
\nTuesday, September 20, 2022<\/u><\/strong><\/p>\n

\u201cJoint estimation of signatures across mutation modalities using Multi-Modal NMF\u201d\u00a0 <\/strong>Kelly Geyer<\/strong>, Ph.D. Candidate, Mathematics and Statistics Program, Lab of Joshua Campbell<\/p>\n

\u201cLearning system-level dependency from human multi-omics data\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Ziwei Huang<\/strong>, Ph.D. Candidate, Physics Program, Lab of Stefano Monti<\/p>\n

Tuesday, October 4, 2022<\/u><\/strong><\/p>\n

\u201cBatch Effect Correction of Metagenomic Data and its Effectiveness in Improving Microbiome Studies\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Howard Fan<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Evan Johnson<\/p>\n

\u201cSpatial Transcriptomics Highlights a Field of Invasion in Early Stage Lung Adenocarcinoma\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Dylan Steiner<\/strong>, Ph.D. Candidate, Genetics and Genomics Program, Lab of Jennifer Beane and Lab of Avrum Spira and Marc Lenburg<\/p>\n

Tuesday, October 18, 2022<\/u><\/strong><\/p>\n

\u201cAn integrated framework for multi-scale and multi-omic spatial analysis\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Jiaji (George) Chen<\/strong>, Ph.D. Candidate, Graduate Program in Genetics and Genomics, Lab of Ruben Dries (Hematology and Oncology)<\/p>\n

\u201cA meta-analysis of 12 NSCLC single-cell RNA-seq datasets reveals gene co-expression programs across cancer cells\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Rui Hong<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Joshua Campbell<\/p>\n

Tuesday, November 1, 2022<\/u><\/strong><\/p>\n

\u201cMultiplexed immune phenotyping and miRNA-ISH in bronchial premalignant lesions reveals a mechanism of immune suppression”\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Darren Chiu, Ph.D.<\/strong>, Postdoctoral Associate, Lab of Jennifer Beane and Lab of Sarah Mazzilli<\/p>\n

\u201cExploring the cellular heterogeneity of 4NQO-induced tumors in mice and their treatment with Wnt\/b-cat\/CBP inhibitor, E7386\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Muzamil Khan<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Ruben Dries and Lab of Stefano Monti<\/p>\n

\u201cGene expression signatures of aging and extreme human longevity using data from Long Life Family Study\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Mengze (Vanessa) Li<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Stefano Monti<\/p>\n

“Cell type localization of gene signatures defining bronchial premalignant lesion molecular subtypes implicates reduced dendritic and B cell antigen presentation in lesion progression”\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Conor Shea<\/strong>, M.D.\/Ph.D. Candidate, Bioinformatics Program, Lab of Jennifer Beane and Lab of Avrum Spira and Marc Lenburg<\/p>\n

Tuesday, December 6, 2022<\/u><\/strong><\/p>\n

\u201cComparison of the tumor and lymph node immune microenvironment in early non-small cell lung cancer through multimodal single cell sequencing\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Zhan Hao (Charley) Xi<\/strong>, Ph.D. Candidate, Molecular and Translational Medicine, Lab of Sarah Mazzilli and Lab of Jennifer Beane<\/p>\n

Tuesday, January 10, 2023<\/u><\/strong><\/p>\n

\u201cImproving the predictive ability of existing TB signatures via ensemble learning\u201d\u00a0 \u00a0 \u00a0<\/strong>Xutao Wang<\/strong>, Ph.D. Candidate, Biostatistics Program, Lab of Evan Johnson<\/p>\n

Tuesday, January 17, 2023<\/u><\/strong><\/p>\n

\u201cComparing transcriptomic alterations from endobronchial biopsies and brushes to determine how cancer alters the airway field”\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Kelley Anderson<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Jennifer Beane and Lab of Avrum Spira and Marc Lenburg<\/p>\n

\u201cEvaluating the Robustness of Single Cell Integration Methods through Creation of a Human Atlas of Head and Neck Squamous Cell Carcinoma\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Lina Kroehling<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Stefano Monti<\/p>\n

\u00a0<\/strong>Tuesday, January 24, 2023<\/u><\/strong><\/p>\n

\u201cExploring the immune contribution to progression of carcinogen-induced lung squamous cell carcinoma premalignancy in an NTCU-sensitive and NTCU-resistant mouse strain\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>T\u00e1chira Pichardo<\/strong>, Ph.D. Candidate, Molecular Translational Medicine, Lab of Sarah Mazzilli, Computational Biomedicine<\/p>\n

\u201cMicrobial dysbiosis and epithelial dysmorphism in Vitamin A-Deficient Lungs\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Kiloni Quiles-Franco<\/strong>, Ph.D. Candidate, Molecular and Translational Medicine, Lab of Evan Johnson and Lab of Felicia Chen (Pulmonary Center)<\/p>\n

\u00a0<\/strong>Tuesday, February 7, 2023<\/u><\/strong><\/p>\n

\u201cThe TBSignatureProfiler: A Novel R Package for Comparing Tuberculosis Gene Expression Signatures\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Aubrey Odom-Mabey<\/strong>, Ph.D. Student, Bioinformatics Program, Lab of Evan Johnson<\/p>\n

Tuesday, February 14, 2023<\/u><\/strong><\/p>\n

\u00a0\u201cData driven analysis of single nucleus RNA-seq data of brain samples associated with Chronic Traumatic Encephalopathy (CTE) disease\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Nida Pervaiz, M.S.,<\/strong> Bioinformatics Analyst, Lab of Joshua Campbell<\/p>\n

Tuesday, February 21, 2023<\/u><\/strong><\/p>\n

\u201cCancer-Associated Gene Expression Alterations in the Nasal Epithelium of Never Smokers”\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Minyi Lee<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Avrum Spira and Marc Lenburg<\/p>\n

“A graph-transformer for whole slide image classification”\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Yi Zheng<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Jennifer Beane and Lab of Vijaya Kolachalama<\/p>\n

Tuesday, February 28, 2023<\/u><\/strong><\/p>\n

\u201cIntegrated multi-omics approach to reveal underlying protective mechanisms of delaying cognitive decline in centenarians\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Anastasia Leshchyk<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Paola Sebastiani & Lab of Stefano Monti<\/p>\n

\u201cTowards the interpretability of “good” models – A review of SHAP framework”\u00a0 <\/strong>Chonghua Xue<\/strong>, Ph.D. Candidate, Electrical Engineering, Lab of Vijaya Kolachalama<\/p>\n

Tuesday, March 7, 2023<\/u><\/strong><\/p>\n

\u201cDisease-driven Domain Generalization for Neuroimaging-based Classification of Alzheimer\u2019s Disease\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Diala Lteif<\/strong>, Ph.D. Candidate, Computer Science Graduate Program, Lab of Vijaya Kolachalama<\/p>\n

Tuesday, March 21, 2023<\/u><\/strong><\/p>\n

\u201cCell segmentation in IMC data\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Roxana Pfefferkorn, Ph.D.<\/strong>, Postdoctoral Fellow, Lab of Joshua Campbell and Lab of Sarah Mazzilli<\/p>\n

\u201cSpatial transcriptomics analysis of Calciphylaxis, a dread complication in CKD patients, reveals mechanistic leads\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Yichi Zhang<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Jennifer Beane and Lab of Vijaya Kolachalama\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0\u00a0<\/strong><\/p>\n

Tuesday, April 4, 2023<\/u><\/strong><\/p>\n

\u201cSingle cell RNA-seq of the airway field of injury associated with lung squamous premalignant lesions\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0<\/strong>Regan Conrad<\/strong>, Ph.D. Candidate, Bioinformatics Program, Lab of Jennifer Beane<\/p>\n

\u201cPanel Design for MERFISH Spatial Transcriptomics\u201d\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Jason Weis<\/strong>, Ph.D. Candidate, Molecular and Translational Medicine Program, Lab of Ruben Dries and Lab of Sarah Mazzilli<\/p>\n

Tuesday, May 2, 2023<\/u><\/strong><\/p>\n

“Deep Graphical Modeling for Mild Cognitive Impairment Risk Subtyping”\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 <\/strong>Meagan Lauber<\/strong>, Ph.D. Candidate, Neuroscience Program, Lab of Vijaya Kolachalam<\/p>\n

 <\/p>\n

 <\/p>\n

 <\/p>\n","protected":false},"excerpt":{"rendered":"

2022-2023 CBM Seminar Series Tuesdays 3:00-4:00 PM Virtual via Zoom Updated 5\/5\/2023   Tuesday, May 16, 2023 Natasha Gurevich, Ph.D. Candidate, Bioinformatics Program, Lab of Joshua Campbell and Lab of Stefano Monti\u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 \u00a0 […]<\/p>\n","protected":false},"author":11679,"featured_media":0,"parent":0,"menu_order":13,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/pages\/1504"}],"collection":[{"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/users\/11679"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/comments?post=1504"}],"version-history":[{"count":49,"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/pages\/1504\/revisions"}],"predecessor-version":[{"id":8313,"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/pages\/1504\/revisions\/8313"}],"wp:attachment":[{"href":"https:\/\/www.bumc.bu.edu\/compbiomed\/wp-json\/wp\/v2\/media?parent=1504"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}