{"id":558,"date":"2009-08-07T15:06:11","date_gmt":"2009-08-07T19:06:11","guid":{"rendered":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/?page_id=558"},"modified":"2019-07-01T10:26:53","modified_gmt":"2019-07-01T14:26:53","slug":"cpctools","status":"publish","type":"page","link":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/","title":{"rendered":"CPC Tools"},"content":{"rendered":"<p>CPC Tools are the software packages developed for proteomics data analysis and\u00a0made freely available to the scientific community.\u00a0 Below are the tools currently available.<\/p>\n<div class=\"row\">\n<div class=\"col-xs-12 col-md-4\">\n<p style=\"text-align: center;\"><a href=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/strap\/\" target=\"_self\"><img loading=\"lazy\" width=\"286\" height=\"251\" title=\"gobarchart\" class=\"size-medium wp-image-564 aligncenter\" alt=\"GO annotation bar chart comparing three samples\" src=\"\/cardiovascularproteomics\/files\/\/2009\/08\/gobarchart-340x300.jpg\" srcset=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/files\/2009\/08\/gobarchart-340x300.jpg 340w, https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/files\/2009\/08\/gobarchart.jpg 645w\" sizes=\"(max-width: 286px) 100vw, 286px\" \/><\/a><\/p>\n<\/div>\n<div class=\"col-xs-12 col-md-8\">\n<p style=\"font-size: 1.4em; line-height: 1.2em; padding-left: 10px;\"><a href=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/strap\/\" target=\"_self\"><strong>STRAP<\/strong><\/a><\/p>\n<p style=\"font-size: 1.4em; line-height: 1.2em; padding-left: 10px;\">STRAP (Software Tool for Rapid Annotation of Proteins) saves you time by automatically annotating a protein list with information that helps you meaningfully interpret your mass spectrometry data.<\/p>\n<\/div>\n<\/div>\n<div class=\"row\">\n<div class=\"col-xs-12 col-md-4\">\n<p style=\"text-align: center;\"><a href=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/strap-ptm\/\"><img loading=\"lazy\" width=\"319\" height=\"207\" title=\"PTMmap\" class=\"aligncenter size-medium wp-image-674\" alt=\"PTMmap\" src=\"\/cardiovascularproteomics\/files\/2011\/04\/PTMmap-461x300.jpg\" srcset=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/files\/2011\/04\/PTMmap-461x300.jpg 461w, https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/files\/2011\/04\/PTMmap.jpg 680w\" sizes=\"(max-width: 319px) 100vw, 319px\" \/><\/a><\/p>\n<\/div>\n<div class=\"col-xs-12 col-md-8\">\n<p style=\"font-size: 1.4em; line-height: 1.2em; padding-left: 10px;\"><a href=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/strap-ptm\/\"><strong>STRAP PTM<\/strong><\/a><\/p>\n<p style=\"font-size: 1.4em; line-height: 1.2em; padding-left: 10px;\">STRAP PTM (Software Tool for Rapid Annotation of Proteins: Post-Translational Modification edition) helps you recognize global, differential post-translational modifications in large proteomics data sets.<\/p>\n<\/div>\n<\/div>\n<div class=\"row\">\n<div class=\"col-xs-12 col-md-4\">\n<p style=\"text-align: center;\"><a href=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/bupid-top-down\/\"><img loading=\"lazy\" width=\"319\" height=\"207\" title=\"PTMmap\" class=\"aligncenter size-medium wp-image-674\" alt=\"PTMmap\" src=\"\/cardiovascularproteomics\/files\/2011\/04\/PTMmap-461x300.jpg\" srcset=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/files\/2011\/04\/PTMmap-461x300.jpg 461w, https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/files\/2011\/04\/PTMmap.jpg 680w\" sizes=\"(max-width: 319px) 100vw, 319px\" \/> <\/a><\/p>\n<\/div>\n<div class=\"col-xs-12 col-md-8\">\n<p style=\"font-size: 1.4em; line-height: 1.2em; padding-left: 10px;\"><a href=\"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/cpctools\/bupid-top-down\/\"><strong>BUPID Top-Down: <em>Coming Soon!<\/em><\/strong><\/a><\/p>\n<p style=\"font-size: 1.4em; line-height: 1.2em; padding-left: 10px;\">BUPID (Boston University Protein Identifier) Top-Down provides you with a series of tools to analyze top-down MS\/MS spectra obtained with a number of fragmentation methods.<\/p>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>CPC Tools are the software packages developed for proteomics data analysis and\u00a0made freely available to the scientific community.\u00a0 Below are the tools currently available. STRAP STRAP (Software Tool for Rapid Annotation of Proteins) saves you time by automatically annotating a protein list with information that helps you meaningfully interpret your mass spectrometry data. STRAP PTM [&hellip;]<\/p>\n","protected":false},"author":1132,"featured_media":0,"parent":0,"menu_order":42,"comment_status":"closed","ping_status":"closed","template":"","meta":[],"_links":{"self":[{"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/pages\/558"}],"collection":[{"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/users\/1132"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/comments?post=558"}],"version-history":[{"count":39,"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/pages\/558\/revisions"}],"predecessor-version":[{"id":2626,"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/pages\/558\/revisions\/2626"}],"wp:attachment":[{"href":"https:\/\/www.bumc.bu.edu\/cardiovascularproteomics\/wp-json\/wp\/v2\/media?parent=558"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}