Daniel Gusenleitner

Daniel-G
Ph.D. Candidate, Bioinformatics, Boston University
Monti Lab

Education

B.S., Bioinformatics, University of Applied Science Hagenberg, Austria, 2008
M.S., Bioinformatics, Högskolan Skövde, Sweden, 2009
M.S., Biomedical Informatics, Univ. of Applied Science Hagenberg, Austria, 2010

Contact Information

Email: gusef@bu.edu

Research Interests

  • Computational Discovery of the Hallmarks of Cancer
  • Genomic Signatures of Carcinogenicity
  • Classification of Diffuse Large B-Cell Lymphoma (DLBCL) Subtypes

Publications

Liu F, White JA, Anotnescu C, Gusenleitner D, Quackenbush J, 2011, GCOD – GeneChip Oncology Database. BMC Bioinformatics, 12, p.46.

Culhane A, Schroder M, Sultana R, Picard S, Martinelli E, Kelly C, Haibe-Kains B, Kapushesky M, St Pierre A, Flahive W, Picard K, Gusenleitner D, Papenhausen G, O’Connor N, Correll M, Quackenbush J, 2012,  GeneSigDB: a manually curated database and resource for analysis of gene expression signatures, NAR

Gusenleitner D, Howe E, Bentink S, Quackenbush J, Culhane A – iBBiG: Iterative Binary Bi-clustering of Gene Sets, Bioinformatics (accepted – in press)

Bioconductor/R packages:

iBBiG (Iterative Binary Biclustering of Genesets): http://www.bioconductor.org/packages/2.11/bioc/html/iBBiG.html

RamiGO (AmiGO visualize R interface): http://bioconductor.org/packages/2.9/bioc/html/RamiGO.html